MolNFT v1 · #17206 · protein
Solution NMR structure of the mitochondrial protein import receptor TOM20 from rat in a complex with a presequence peptide derived from rat aldehyde dehydrogenase (aldh)
1OM2 · Protein (mitochondrial import receptor subunit TOM20): “Solution NMR structure of the mitochondrial protein import receptor TOM20 from rat in a complex with a…”. Solution nmr, 1 pocket (best druggability 0.56). MolNFT v1 #17206 on…
- PDB
- 1OM2
- Type
- protein
- Length
- 106 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (mitochondrial import receptor subunit TOM20); Protein (mitochondrial aldehyde…
- EC
- 1.2.1.3
- UniProt
- Q62760, P11884
- Pockets
- 1 · best druggability 0.56
Structure
solution nmr · 2 distinct chains · 65% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (mitochondrial import receptor subunit TOM20) | protein | 95 | 68% helix, 0% strand | Q62760 |
| B | Protein (mitochondrial aldehyde dehydrogenase) (EC 1.2.1.3) | protein | 11 | 36% helix, 0% strand | P11884 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 77 | 0.56 | 0.86 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 537 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 1OM2 · Solution NMR structure of the mitochondrial protein import receptor TOM20 from rat in a… · the same entry in another collection · chain A against A, TM-score 1.00
- Q62760 · AlphaFold monomer V2.0 prediction for mitochondrial import receptor subunit TOM20 homolog… · a predicted model of the same protein · chain A against A, TM-score 0.64
- P11884 · AlphaFold monomer V2.0 prediction for aldehyde dehydrogenase, mitochondrial (P11884) · a predicted model of the same protein · chain B against A, TM-score 0.35
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q62760
- Every structure of UniProt P11884
- Elsewhere: RCSB PDB 1OM2 · PDBe 1OM2 · UniProt Q62760 · UniProt P11884
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