MolNFT v1 · #17204 · protein
Crystal structure of xylanase inhibitor protein (xip-I) from wheat
1OM0 · Xylanase inhibitor protein I: “Crystal structure of xylanase inhibitor protein (xip-I) from wheat”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #17204 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1OM0
- Type
- protein
- Length
- 274 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Xylanase inhibitor protein I
- UniProt
- Q8L5C6
- Ligands
- NAG
Structure
x-ray diffraction · 1 distinct chain · 32% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Xylanase inhibitor protein I | protein | 274 | 32% helix, 22% strand | Q8L5C6 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
- EDO · 1,2-ethanediol · additive · 9 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 glycan, 1 disulfide (N-glycosylation, disulfide).
Compared structures
- 1OM0 · crystal structure of xylanase inhibitor protein (XIP-I) from wheat · the same entry in another collection · chain A against A, TM-score 1.00
- Q8L5C6 · AlphaFold monomer V2.0 prediction for xylanase inhibitor protein 1 (Q8L5C6) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8L5C6
- Elsewhere: RCSB PDB 1OM0 · PDBe 1OM0 · UniProt Q8L5C6
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