MolNFT v1 · #171986 · protein
[1,2,4]TRIAZOLO[1,5-A]PYRIMIDINE phosphodiesterase 2 inhibitors
6ZND: “[1,2,4]TRIAZOLO[1,5-A]PYRIMIDINE phosphodiesterase 2 inhibitors”. X-ray diffraction, 3 ligands (QMZ, ZN, MG). MolNFT v1 #171986 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6ZND
- Type
- protein
- Length
- 658 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O00408
- Ligands
- QMZ, ZN, MG
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 324 | — | O00408 |
| B | — | protein | 334 | — | O00408 |
Ligands and binding sites
- QMZ · [(3~{S})-3-([1,2,4]triazolo[1,5-a]pyrimidin-7-yl) piperidin-1-yl]-(3,4,5-trimethoxyphenyl)methanone · ligand · 2 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
- MG · Magnesium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6ZND · [1,2,4]Triazolo[1,5-a]pyrimidine Phosphodiesterase 2 Inhibitors · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O00408
- Elsewhere: RCSB PDB 6ZND · PDBe 6ZND · UniProt O00408
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