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MolNFT v1 · #171972 · protein

Crystal structure of the germline-specific thioredoxin protein deadhead (thioredoxin-1) from drospohila melanogaster, P43212

6ZMU: “Crystal structure of the germline-specific thioredoxin protein deadhead (thioredoxin-1) from drospohila…”. X-ray diffraction, 2 ligands (NA, SO4). MolNFT v1 #171972 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6ZMU
Type
protein
Length
423 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P47938
Ligands
NA, SO4

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein107—P47938
B, C—protein105—P47938
D—protein106—P47938

Ligands and binding sites

  • NA · Sodium ion · metal · chains B, C
  • SO4 · Sulfate ion · ion · 15 copies · chains A, B, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6ZMU · Crystal structure of the germline-specific thioredoxin protein Deadhead (Thioredoxin-1)… · the same entry in another collection · chain A against A, TM-score 1.00
  • P47938 · AlphaFold monomer V2.0 prediction for thioredoxin-1 (P47938) · a predicted model of the same protein · chain D against A, TM-score 0.98

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