MolNFT v1 · #171948 · protein

MREC

6ZLV · Rod shape-determining protein mrec: “MREC”. Electron microscopy, 9 pockets (best druggability 0.76). MolNFT v1 #171948 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6ZLV
Type: protein
Length: 704 residues
Chains: 4
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Rod shape-determining protein mrec
UniProt: A0A6A9K3A1
Pockets: 9 · best druggability 0.76

Structure

electron microscopy · 1 distinct chain · 11% helix, 40% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B, C, D	Rod shape-determining protein mrec	protein	176	11% helix, 40% strand	A0A6A9K3A1

Pockets

9 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	699	0.76	0.81	110	empty
2	52	0.58	0.91	19	empty
3	93	0.56	0.86	25	empty
4	151	0.52	0.80	26	empty
5	136	0.51	0.80	23	empty

Interfaces

6 interfaces between chains.

C–D · 894 Å² buried · 23 hydrogen bonds · protein-protein
A–B · 893 Å² buried · 23 hydrogen bonds · protein-protein
A–C · 761 Å² buried · 5 hydrogen bonds · protein-protein
B–D · 752 Å² buried · 5 hydrogen bonds · protein-protein
A–D · 135 Å² buried · 0 hydrogen bonds · protein-protein

Compared structures

6ZLV · MreC · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A6A9K3A1
Elsewhere: RCSB PDB 6ZLV · PDBe 6ZLV · UniProt A0A6A9K3A1

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