MolNFT v1 · #171947 · protein

Closed-closed state of the BT1762-BT1763 levan transport system

6ZLU · Susd homolog: “Closed-closed state of the BT1762-BT1763 levan transport system”. Electron microscopy, 14 pockets (best druggability 0.83). MolNFT v1 #171947 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6ZLU
Type: protein
Length: 1,359 residues
Chains: 2
Method: electron microscopy
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Susd homolog; Susc homolog
UniProt: Q8A6W4, Q8A6W3
Pockets: 14 · best druggability 0.83

Structure

electron microscopy · 2 distinct chains · 24% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Susd homolog	protein	555	44% helix, 8% strand	Q8A6W4
B	Susc homolog	protein	804	10% helix, 51% strand	Q8A6W3

Pockets

14 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	198	0.83	0.97	45	empty
2	1111	0.79	0.81	154	empty
3	83	0.64	0.91	29	empty
4	217	0.55	0.79	33	empty
5	182	0.51	0.78	42	empty

Interfaces

1 interface between chains.

A–B · 4415 Å² buried · 92 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

6ZLU · Closed-closed state of the Bt1762-Bt1763 levan transport system · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8A6W4
Every structure of UniProt Q8A6W3
Elsewhere: RCSB PDB 6ZLU · PDBe 6ZLU · UniProt Q8A6W4 · UniProt Q8A6W3

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