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MolNFT v1 · #171869 · protein

Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor AP5A

6ZJE: “Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor AP5A”. X-ray diffraction, 4 ligands (AP5, NA, MG). MolNFT v1 #171869 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6ZJE
Type
protein
Length
214 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9UIJ7
Ligands
AP5, NA, MG, CL

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein214—Q9UIJ7

Ligands and binding sites

  • AP5 · Bis(adenosine)-5'-pentaphosphate · ligand · chains A
  • NA · Sodium ion · metal
  • MG · Magnesium ion · metal
  • CL · Chloride ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6ZJE · Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Ap5A · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9UIJ7 · AlphaFold monomer V2.0 prediction for GTP:AMP phosphotransferase AK3, mitochondrial… · a predicted model of the same protein · chain A against A, TM-score 0.76

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