MolNFT v1 · #171814 · protein
CA2+-ATPase from listeria monocytogenes in complex with alf
6ZHG · Calcium-transporting ATPase: “CA2+-ATPase from listeria monocytogenes in complex with alf”. X-ray diffraction, 2 ligands (ALF, MG), 14 pockets (best druggability 0.78). MolNFT v1 #171814 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6ZHG
- Type
- protein
- Length
- 879 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Calcium-transporting ATPase
- UniProt
- A0A1C7PY84
- Ligands
- ALF, MG
- Pockets
- 14 · best druggability 0.78
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Calcium-transporting ATPase | protein | 879 | 49% helix, 11% strand | A0A1C7PY84 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
14 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1177 | 0.78 | 0.80 | 95 | empty |
| 2 | 771 | 0.77 | 0.81 | 86 | empty |
| 3 | 267 | 0.73 | 0.87 | 38 | empty |
| 4 | 51 | 0.62 | 0.93 | 17 | empty |
| 5 | 68 | 0.55 | 0.87 | 22 | empty |
Compared structures
- 6ZHG · Ca2+-ATPase from Listeria Monocytogenes in complex with AlF · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1C7PY84
- Elsewhere: RCSB PDB 6ZHG · PDBe 6ZHG · UniProt A0A1C7PY84
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