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MolNFT v1 · #171545 · protein + DNA

X-ray structure of the complex between human alpha thrombin and a thrombin binding aptamer variant (tba-3LEU), which contains leucyl amide in the side chain of THY3 at N3.

6Z8X: “X-ray structure of the complex between human alpha thrombin and a thrombin binding aptamer variant…”. X-ray diffraction, 2 ligands (NA, K). MolNFT v1 #171545 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6Z8X
Type
protein + DNA
Length
290 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P00734
Ligands
NA, K

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
L—protein26—P00734
H—protein250—P00734
B—dna14——

Ligands and binding sites

  • NA · Sodium ion · metal · chains H
  • K · Potassium ion · metal · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6Z8X · X-ray structure of the complex between human alpha thrombin and a thrombin binding… · the same entry in another collection · chain L against L, TM-score 1.00

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