MolNFT v1 · #171449 · protein
Crystal structure of haspin (GSG2) in complex with macrocycle ODS2004082
6Z5D: “Crystal structure of haspin (GSG2) in complex with macrocycle ODS2004082”. X-ray diffraction, 2 ligands (Q8Q, NA). MolNFT v1 #171449 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Z5D
- Type
- protein
- Length
- 329 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8TF76
- Ligands
- Q8Q, NA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 329 | — | Q8TF76 |
Ligands and binding sites
- Q8Q · 11-methyl-8,11,14,18,19,22-hexazatetracyclo[13.5.2.12, 6.018,21]tricosa-1(21),2(23),3,5,15(22),16,19-heptaen-7-one · ligand · chains A
- NA · Sodium ion · metal · chains A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains A
- DMS · Dimethyl sulfoxide · additive · chains A
- SIN · Succinic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Z5D · Crystal structure of haspin (GSG2) in complex with macrocycle ODS2004082 · the same entry in another collection · chain A against A, TM-score 1.00
- Q8TF76 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase haspin (Q8TF76) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8TF76
- Elsewhere: RCSB PDB 6Z5D · PDBe 6Z5D · UniProt Q8TF76
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.