MolNFT v1 · #171220 · protein
Structure of chloroflexus aggregans flavin based fluorescent protein (cagfbfp) Q148R variant
6YXC · Multi-sensor hybrid histidine kinase: “Structure of chloroflexus aggregans flavin based fluorescent protein (cagfbfp) Q148R variant”. X-ray diffraction, 2 ligands (FMN, NA), 3 pockets (best druggability 0.77). MolNFT v1 #171220 on…
- PDB
- 6YXC
- Type
- protein
- Length
- 207 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Multi-sensor hybrid histidine kinase
- UniProt
- B8GAY9
- Ligands
- FMN, NA
- Pockets
- 3 · best druggability 0.77
Structure
x-ray diffraction · 2 distinct chains · 27% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Multi-sensor hybrid histidine kinase | protein | 104 | 26% helix, 38% strand | B8GAY9 |
| B | Multi-sensor hybrid histidine kinase | protein | 103 | 27% helix, 38% strand | B8GAY9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 208 | 0.77 | 0.91 | 31 | FMN |
| 2 | 201 | 0.76 | 0.91 | 31 | FMN |
| 3 | 113 | 0.40 | 0.76 | 24 | empty |
Interfaces
1 interface between chains.
- A–B · 763 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 6YXC · Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148R… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8GAY9
- Elsewhere: RCSB PDB 6YXC · PDBe 6YXC · UniProt B8GAY9
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