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MolNFT v1 · #17120 · protein

Nonproductive and novel binding modes in cytotoxic ribonucleases from rana catesbeiana of two crystal structures complexed with (2,5 cpg) and D(APCPGPA)

1OJ1 · Rc-RNASE6 ribonuclease: “Nonproductive and novel binding modes in cytotoxic ribonucleases from rana catesbeiana of two crystal…”. X-ray diffraction, 2 ligands (CG2, SO4). MolNFT v1 #17120 on GenesisL1: 3D structure, binding sites…

PDB
1OJ1
Type
protein
Length
105 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Rc-RNASE6 ribonuclease
UniProt
Q9DFY5
Ligands
CG2, SO4

Structure

x-ray diffraction · 1 distinct chain · 17% helix, 38% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ARc-RNASE6 ribonucleaseprotein10517% helix, 38% strandQ9DFY5

Ligands and binding sites

  • CG2 · Cytidyl-2'-5'-phospho-guanosine · ligand · chains A
  • SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 disulfide, 1 modified (disulfide, cyclization).

Compared structures

  • 1OJ1 · Nonproductive and Novel Binding Modes in Cytotoxic Ribonucleases from Rana catesbeiana of… · the same entry in another collection · chain A against A, TM-score 1.00

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