MolNFT v1 · #171063 · protein + RNA
Cryo-EM structure of the 50S ribosomal subunit at 2.58 ångströms with modeled gbc secm peptide
6YS3: “Cryo-EM structure of the 50S ribosomal subunit at 2.58 ångströms with modeled gbc secm peptide”. Electron microscopy. MolNFT v1 #171063 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YS3
- Type
- protein + RNA
- Length
- 6,217 residues
- Chains
- 32
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A140N3L9, A0A140N7F5, A0A140N7G4, A0A140NAZ2, A0A140N5Z7, A0A140NHV0, A0A140N9E3, A0A140N5M6, A0A140N7J1, A0A140N3G7, A0A140N5K8, A0A140N5A3, A0A140N2T1, A0A140NDV1, A0A140N598, A0A140N3H4, A0A140N711, A0A140N6Z2, A0A140N4M0, A0A140N4L0, A0A140N6T7, A0A140NBS1, A0A140N5D7, A0A140N2S3, C6EGE8, A0A140N5L7, A0A140N846, A0A140N340, P02526
Structure
electron microscopy · 32 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| 0 | — | protein | 77 | — | A0A140N3L9 |
| 1 | — | protein | 61 | — | A0A140N7F5 |
| 2 | — | protein | 57 | — | A0A140N7G4 |
| 3 | — | protein | 55 | — | A0A140NAZ2 |
| 4 | — | protein | 50 | — | A0A140N5Z7 |
| 6 | — | protein | 46 | — | A0A140NHV0 |
| 7 | — | protein | 64 | — | A0A140N9E3 |
| 8 | — | protein | 38 | — | A0A140N5M6 |
| a | — | rna | 118 | — | — |
| b | — | rna | 2888 | — | — |
| c | — | protein | 271 | — | A0A140N7J1 |
| d | — | protein | 209 | — | A0A140N3G7 |
| e | — | protein | 201 | — | A0A140N5K8 |
| f | — | protein | 177 | — | A0A140N5A3 |
| g | — | protein | 176 | — | A0A140N2T1 |
| h | — | protein | 39 | — | A0A140NDV1 |
| j | — | protein | 142 | — | A0A140N598 |
| k | — | protein | 122 | — | A0A140N3H4 |
| l | — | protein | 143 | — | A0A140N711 |
| m | — | protein | 136 | — | A0A140N6Z2 |
| n | — | protein | 120 | — | A0A140N4M0 |
| o | — | protein | 116 | — | A0A140N4L0 |
| p | — | protein | 113 | — | A0A140N6T7 |
| q | — | protein | 117 | — | A0A140NBS1 |
| r | — | protein | 99 | — | A0A140N5D7 |
| s | — | protein | 109 | — | A0A140N2S3 |
| t | — | protein | 93 | — | C6EGE8 |
| u | — | protein | 102 | — | A0A140N5L7 |
| v | — | rna | 75 | — | — |
| w | — | protein | 94 | — | A0A140N846 |
| y | — | protein | 74 | — | A0A140N340 |
| z | — | protein | 35 | — | P02526 |
Compared structures
- 6YS3 · Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM… · the same entry in another collection · chain 0 against 0, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A140N3L9
- Every structure of UniProt A0A140N7F5
- Every structure of UniProt A0A140N7G4
- Every structure of UniProt A0A140NAZ2
- Every structure of UniProt A0A140N5Z7
- Every structure of UniProt A0A140NHV0
- Every structure of UniProt A0A140N9E3
- Every structure of UniProt A0A140N5M6
- Every structure of UniProt A0A140N7J1
- Every structure of UniProt A0A140N3G7
- Every structure of UniProt A0A140N5K8
- Every structure of UniProt A0A140N5A3
- Every structure of UniProt A0A140N2T1
- Every structure of UniProt A0A140NDV1
- Every structure of UniProt A0A140N598
- Every structure of UniProt A0A140N3H4
- Every structure of UniProt A0A140N711
- Every structure of UniProt A0A140N6Z2
- Every structure of UniProt A0A140N4M0
- Every structure of UniProt A0A140N4L0
- Every structure of UniProt A0A140N6T7
- Every structure of UniProt A0A140NBS1
- Every structure of UniProt A0A140N5D7
- Every structure of UniProt A0A140N2S3
- Every structure of UniProt C6EGE8
- Every structure of UniProt A0A140N5L7
- Every structure of UniProt A0A140N846
- Every structure of UniProt A0A140N340
- Every structure of UniProt P02526
- Elsewhere: RCSB PDB 6YS3 · PDBe 6YS3 · UniProt A0A140N3L9 · UniProt A0A140N7F5 · UniProt A0A140N7G4 · UniProt A0A140NAZ2 · UniProt A0A140N5Z7 · UniProt A0A140NHV0 · UniProt A0A140N9E3 · UniProt A0A140N5M6 · UniProt A0A140N7J1 · UniProt A0A140N3G7 · UniProt A0A140N5K8 · UniProt A0A140N5A3 · UniProt A0A140N2T1 · UniProt A0A140NDV1 · UniProt A0A140N598 · UniProt A0A140N3H4 · UniProt A0A140N711 · UniProt A0A140N6Z2 · UniProt A0A140N4M0 · UniProt A0A140N4L0 · UniProt A0A140N6T7 · UniProt A0A140NBS1 · UniProt A0A140N5D7 · UniProt A0A140N2S3 · UniProt C6EGE8 · UniProt A0A140N5L7 · UniProt A0A140N846 · UniProt A0A140N340 · UniProt P02526
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