GL1X · GenesisL1 explorer

MolNFT v1 · #171018 · protein

Crystal structure of native phycocyanin in spacegroup P63 at 1.45 ångströms.

6YQG: “Crystal structure of native phycocyanin in spacegroup P63 at 1.45 ångströms.”. X-ray diffraction, 2 ligands (CYC, TE4). MolNFT v1 #171018 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6YQG
Type
protein
Length
334 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P50032, P50033
Ligands
CYC, TE4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein162—P50032
B—protein172—P50033

Ligands and binding sites

  • CYC · Phycocyanobilin · ligand · 3 copies · chains A, B
  • TE4 · Tetracaine · ligand · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6YQG · Crystal structure of native Phycocyanin in spacegroup P63 at 1.45 Angstroms. · the same entry in another collection · chain A against A, TM-score 1.00
  • P50033 · AlphaFold monomer V2.0 prediction for C-phycocyanin beta subunit (P50033) · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P50032 · AlphaFold monomer V2.0 prediction for C-phycocyanin alpha subunit (P50032) · a predicted model of the same protein · chain A against A, TM-score 0.98

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