MolNFT v1 · #171013 · protein
Crystal structure of fusobacterium nucleatum tannase
6YQ4: “Crystal structure of fusobacterium nucleatum tannase”. X-ray diffraction, 2 ligands (SPD, MG). MolNFT v1 #171013 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YQ4
- Type
- protein
- Length
- 1,436 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8RFS1
- Ligands
- SPD, MG
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 478 | — | Q8RFS1 |
| B | — | protein | 480 | — | Q8RFS1 |
| C | — | protein | 478 | — | Q8RFS1 |
Ligands and binding sites
- SPD · Spermidine · ligand · chains B
- MG · Magnesium ion · metal · 3 copies · chains A, B, C
- GOL · Glycerol · additive · 3 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YQ4 · Crystal structure of Fusobacterium nucleatum tannase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8RFS1
- Elsewhere: RCSB PDB 6YQ4 · PDBe 6YQ4 · UniProt Q8RFS1
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