MolNFT v1 · #170941 · protein
Structure of SARS-cov-2 main protease bound to 2-methyl-1-tetralone.
6YNQ: “Structure of SARS-cov-2 main protease bound to 2-methyl-1-tetralone.”. X-ray diffraction, 2 ligands (P6N, CL). MolNFT v1 #170941 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YNQ
- Type
- protein
- Length
- 306 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- P6N, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 306 | — | P0DTD1 |
Ligands and binding sites
- P6N · (2~{S})-2-methyl-3,4-dihydro-2~{H}-naphthalen-1-one · ligand · chains A
- CL · Chloride ion · ion · chains A
- DMS · Dimethyl sulfoxide · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YNQ · Structure of SARS-CoV-2 Main Protease bound to 2-Methyl-1-tetralone. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 6YNQ · PDBe 6YNQ · UniProt P0DTD1
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