MolNFT v1 · #170806 · protein
Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from pegsmear at pH 6.5
6YJF: “Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from pegsmear at pH 6.5”. X-ray diffraction, 1 ligand (OTQ). MolNFT v1 #170806 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YJF
- Type
- protein
- Length
- 416 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1G4HAR7
- Ligands
- OTQ
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 416 | — | A0A1G4HAR7 |
Ligands and binding sites
- OTQ · (2~{S})-2-(5-nitrofuran-2-yl)-2,3,5,6,7,8-hexahydro-1~{H}-[1]benzothiolo[2,3-d]pyrimidin-4-one · ligand · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YJF · Plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from PEGSmear at… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1G4HAR7
- Elsewhere: RCSB PDB 6YJF · PDBe 6YJF · UniProt A0A1G4HAR7
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