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MolNFT v1 · #170670 · protein

VCAM4I restriction endonuclease in the absence of DNA

6YEX: “VCAM4I restriction endonuclease in the absence of DNA”. X-ray diffraction, 2 ligands (CL, SO4). MolNFT v1 #170670 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6YEX
Type
protein
Length
612 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
A0A344KQF3
Ligands
CL, SO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein309—A0A344KQF3
B—protein303—A0A344KQF3

Ligands and binding sites

  • CL · Chloride ion · ion · 12 copies · chains A, B
  • SO4 · Sulfate ion · ion · 7 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6YEX · VcaM4I restriction endonuclease in the absence of DNA · the same entry in another collection · chain A against A, TM-score 1.00

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