MolNFT v1 · #170607 · protein + DNA
Human transcription cofactor PC4 DNA-binding domain in complex with full phosphorothioate 5-10-5 2'-O-methyl DNA gapmer antisense oligonucleotide.
6YCS: “Human transcription cofactor PC4 DNA-binding domain in complex with full phosphorothioate 5-10-5 2'-O-methyl…”. X-ray diffraction, 2 ligands (NA, SO4). MolNFT v1 #170607 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YCS
- Type
- protein + DNA
- Length
- 294 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q6IBA2
- Ligands
- NA, SO4
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 66 | — | Q6IBA2 |
| B | — | protein | 67 | — | Q6IBA2 |
| C | — | protein | 68 | — | Q6IBA2 |
| D | — | protein | 65 | — | Q6IBA2 |
| E | — | dna | 16 | — | — |
| F | — | dna | 12 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YCS · Human Transcription Cofactor PC4 DNA-binding domain in complex with full phosphorothioate… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6IBA2
- Elsewhere: RCSB PDB 6YCS · PDBe 6YCS · UniProt Q6IBA2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.