MolNFT v1 · #170478 · protein

Rhodospirillum rubrum oxidized coot solution structure

6Y8V: “Rhodospirillum rubrum oxidized coot solution structure”. Solution nmr, 1 pocket (best druggability 0.52). MolNFT v1 #170478 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6Y8V
Type: protein
Length: 140 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Coot
UniProt: P72320
Pockets: 1 · best druggability 0.52

Structure

solution nmr · 1 distinct chain · 0% helix, 60% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Coot	protein	70	0% helix, 60% strand	P72320

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	156	0.52	0.79	27	empty

Interfaces

1 interface between chains.

A–B · 962 Å² buried · 19 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

6Y8V · Rhodospirillum rubrum oxidized CooT solution structure · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P72320
Elsewhere: RCSB PDB 6Y8V · PDBe 6Y8V · UniProt P72320

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