MolNFT v1 · #170470 · protein
Crystal structure of the apo form of a quaternary ammonium rieske monooxygenase cnta
6Y8J · Carnitine monooxygenase oxygenase subunit: “Crystal structure of the apo form of a quaternary ammonium rieske monooxygenase cnta”. X-ray diffraction, 1 ligand (FES), 2 pockets (best druggability 0.69). MolNFT v1 #170470 on…
- PDB
- 6Y8J
- Type
- protein
- Length
- 343 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Carnitine monooxygenase oxygenase subunit
- EC
- 1.14.13.239
- UniProt
- A0A059ZPP5
- Ligands
- FES
- Pockets
- 2 · best druggability 0.69
Structure
x-ray diffraction · 1 distinct chain · 26% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Carnitine monooxygenase oxygenase subunit (EC 1.14.13.239) | protein | 343 | 26% helix, 30% strand | A0A059ZPP5 |
Ligands and binding sites
- FES · Fe2/s2 (inorganic) cluster · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 321 | 0.69 | 0.82 | 31 | empty |
| 2 | 185 | 0.56 | 0.79 | 22 | empty |
Compared structures
- 6Y8J · Crystal structure of the apo form of a quaternary ammonium Rieske monooxygenase CntA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A059ZPP5
- Elsewhere: RCSB PDB 6Y8J · PDBe 6Y8J · UniProt A0A059ZPP5
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