MolNFT v1 · #170409 · protein

Structure of mature activin a with small molecule 42

6Y6O: “Structure of mature activin a with small molecule 42”. X-ray diffraction, 2 ligands (OCK, SO4). MolNFT v1 #170409 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6Y6O
Type: protein
Length: 226 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P08476
Ligands: OCK, SO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	116	—	P08476
B	—	protein	110	—	P08476

Ligands and binding sites

OCK · (3~{R})-4-ethyl-3-methyl-3-propyl-1~{H}-1,4-benzodiazepine-2,5-dione · ligand · chains A, B
SO4 · Sulfate ion · ion · 5 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6Y6O · Structure of mature activin A with small molecule 42 · the same entry in another collection · chain A against A, TM-score 1.00
P08476 · AlphaFold monomer V2.0 prediction for inhibin beta a chain (P08476) · a predicted model of the same protein · chain B against A, TM-score 0.84

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P08476
Elsewhere: RCSB PDB 6Y6O · PDBe 6Y6O · UniProt P08476

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