MolNFT v1 · #170404 · protein
Vim-2 in complex with biapenem imine and enamine hydrolysis products
6Y6J: “Vim-2 in complex with biapenem imine and enamine hydrolysis products”. X-ray diffraction, 4 ligands (OEN, OEQ, ZN). MolNFT v1 #170404 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Y6J
- Type
- protein
- Length
- 231 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- D1MEN9
- Ligands
- OEN, OEQ, ZN, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 231 | — | D1MEN9 |
Ligands and binding sites
- OEN · Biapenem Imine hydrolysis product · ligand · chains A
- OEQ · Biapenem Enamine hydrolysis product · ligand · chains A
- ZN · Zinc ion · metal · 3 copies · chains A
- CL · Chloride ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Y6J · VIM-2 in Complex with Biapenem Imine and Enamine Hydrolysis Products · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D1MEN9
- Elsewhere: RCSB PDB 6Y6J · PDBe 6Y6J · UniProt D1MEN9
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