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MolNFT v1 · #170279 · protein

Crystal structure of the second kh domain of FUBP1

6Y2D: “Crystal structure of the second kh domain of FUBP1”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #170279 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6Y2D
Type
protein
Length
277 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q96AE4
Ligands
SO4

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein65—Q96AE4
B—protein70—Q96AE4
C—protein68—Q96AE4
D—protein74—Q96AE4

Ligands and binding sites

  • SO4 · Sulfate ion · ion · 4 copies · chains A, B, C, D
  • GOL · Glycerol · additive · chains B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6Y2D · Crystal structure of the second KH domain of FUBP1 · the same entry in another collection · chain D against D, TM-score 1.00
  • Q96AE4 · AlphaFold monomer V2.0 prediction for far upstream element-binding protein 1 (Q96AE4) · a predicted model of the same protein · chain B against A, TM-score 0.95

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