MolNFT v1 · #170264 · protein
X-ray structure of the radical SAM protein nifb, a key nitrogenase maturating enzyme
6Y1X: “X-ray structure of the radical SAM protein nifb, a key nitrogenase maturating enzyme”. X-ray diffraction, 3 ligands (SF4, SO4, CL). MolNFT v1 #170264 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6Y1X
- Type
- protein
- Length
- 504 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0B690
- Ligands
- SF4, SO4, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 252 | — | A0B690 |
Ligands and binding sites
- SF4 · Iron/sulfur cluster · ligand · 4 copies · chains A, B
- SO4 · Sulfate ion · ion · 5 copies · chains A, B
- CL · Chloride ion · ion · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6Y1X · X-ray structure of the radical SAM protein NifB, a key nitrogenase maturating enzyme · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0B690
- Elsewhere: RCSB PDB 6Y1X · PDBe 6Y1X · UniProt A0B690
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