MolNFT v1 · #170112 · protein

The unique CBM3-CLOCL_1192 of hungateiclostridium clariflavum

6XX1 · Cellulose binding domain-containing protein: “The unique CBM3-CLOCL_1192 of hungateiclostridium clariflavum”. X-ray diffraction, 2 pockets (best druggability 0.51). MolNFT v1 #170112 on GenesisL1: 3D structure, binding sites and…

PDB: 6XX1
Type: protein
Length: 590 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cellulose binding domain-containing protein
UniProt: G8LYV1
Pockets: 2 · best druggability 0.51

Structure

x-ray diffraction · 3 distinct chains · 8% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Cellulose binding domain-containing protein	protein	148	8% helix, 45% strand	G8LYV1
C	Cellulose binding domain-containing protein	protein	148	8% helix, 45% strand	G8LYV1
D	Cellulose binding domain-containing protein	protein	146	8% helix, 46% strand	G8LYV1

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	159	0.51	0.79	22	empty
2	74	0.28	0.73	18	empty

Interfaces

3 interfaces between chains.

A–B · 721 Å² buried · 11 hydrogen bonds · protein-protein
C–D · 693 Å² buried · 10 hydrogen bonds · protein-protein
B–C · 392 Å² buried · 8 hydrogen bonds · protein-protein

Compared structures

6XX1 · The unique CBM3-Clocl_1192 of Hungateiclostridium clariflavum · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G8LYV1
Elsewhere: RCSB PDB 6XX1 · PDBe 6XX1 · UniProt G8LYV1

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