MolNFT v1 · #169914 · protein
Room-temperature X-ray crystal structure of SARS-cov-2 main protease in complex with narlaprevir
6XQT: “Room-temperature X-ray crystal structure of SARS-cov-2 main protease in complex with narlaprevir”. X-ray diffraction, 1 ligand (NNA). MolNFT v1 #169914 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XQT
- Type
- protein
- Length
- 612 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTD1
- Ligands
- NNA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 306 | — | P0DTD1 |
Ligands and binding sites
- NNA · (1R,2S,5S)-3-[N-({1-[(tert-butylsulfonyl) methyl]cyclohexyl}carbamoyl)-3-methyl-L-valyl]-N-{(1S)-1-[(1R)-2-(cyclopropylamino)-1-hydroxy-2-oxoethyl]pentyl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XQT · Room-temperature X-ray Crystal structure of SARS-CoV-2 main protease in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTD1
- Elsewhere: RCSB PDB 6XQT · PDBe 6XQT · UniProt P0DTD1
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