MolNFT v1 · #169876 · protein
Crystal structure of itaconate modified mycobaterium tuberculosis isocitrate lyase
6XPP: “Crystal structure of itaconate modified mycobaterium tuberculosis isocitrate lyase”. X-ray diffraction, 2 ligands (ITN, MG). MolNFT v1 #169876 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XPP
- Type
- protein
- Length
- 1,702 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P9WKK7
- Ligands
- ITN, MG
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 426 | — | P9WKK7 |
| B | — | protein | 424 | — | P9WKK7 |
| C | — | protein | 425 | — | P9WKK7 |
| D | — | protein | 427 | — | P9WKK7 |
Ligands and binding sites
- ITN · 2-methylidenebutanedioic acid · ligand · 4 copies · chains A, B, C, D
- MG · Magnesium ion · metal · 8 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XPP · Crystal structure of itaconate modified Mycobaterium tuberculosis isocitrate lyase · the same entry in another collection · chain D against D, TM-score 1.00
- P9WKK7 · AlphaFold monomer V2.0 prediction for isocitrate lyase (P9WKK7) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WKK7
- Elsewhere: RCSB PDB 6XPP · PDBe 6XPP · UniProt P9WKK7
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