MolNFT v1 · #169842 · protein

Structure of the self-association domain of swallow

6XOR · Protein swallow: “Structure of the self-association domain of swallow”. Solution nmr, 1 pocket (best druggability 0.34). MolNFT v1 #169842 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6XOR
Type: protein
Length: 142 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein swallow
UniProt: P40688
Pockets: 1 · best druggability 0.34

Structure

solution nmr · 1 distinct chain · 89% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Protein swallow	protein	71	89% helix, 0% strand	P40688

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.34	0.78	14	empty

Interfaces

1 interface between chains.

A–B · 1955 Å² buried · 10 hydrogen bonds · protein-protein

Compared structures

6XOR · Structure of the Self-Association Domain of Swallow · the same entry in another collection · chain A against A, TM-score 1.00
P40688 · AlphaFold monomer V2.0 prediction for protein swallow (P40688) · a predicted model of the same protein · chain A against A, TM-score 0.46

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P40688
Elsewhere: RCSB PDB 6XOR · PDBe 6XOR · UniProt P40688

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