MolNFT v1 · #169682 · protein
Crystal structure of ribokinase from cryptococcus neoformans var. grubii serotype a in complex with ADP
6XK2: “Crystal structure of ribokinase from cryptococcus neoformans var. grubii serotype a in complex with ADP”. X-ray diffraction, 2 ligands (ADP, NA). MolNFT v1 #169682 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6XK2
- Type
- protein
- Length
- 1,266 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- J9VQ51
- Ligands
- ADP, NA
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 320 | — | J9VQ51 |
| B | — | protein | 320 | — | J9VQ51 |
| C | — | protein | 311 | — | J9VQ51 |
| D | — | protein | 315 | — | J9VQ51 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 4 copies · chains A, B, C, D
- NA · Sodium ion · metal · 3 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 3 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6XK2 · Crystal structure of Ribokinase from Cryptococcus neoformans var. grubii serotype A in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J9VQ51
- Elsewhere: RCSB PDB 6XK2 · PDBe 6XK2 · UniProt J9VQ51
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