MolNFT v1 · #16940 · protein

1.85 a structure of CYP154A1 from streptomyces coelicolor A3(2)

1ODO · Putative cytochrome P450 154A1: “1.85 a structure of CYP154A1 from streptomyces coelicolor A3(2)”. X-ray diffraction, 2 ligands (HEM, PIM), 5 pockets (best druggability 0.86). MolNFT v1 #16940 on GenesisL1: 3D structure, binding…

PDB: 1ODO
Type: protein
Length: 395 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative cytochrome P450 154A1
UniProt: Q9KZR7
Ligands: HEM, PIM
Pockets: 5 · best druggability 0.86

Structure

x-ray diffraction · 1 distinct chain · 52% helix, 10% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative cytochrome P450 154A1	protein	395	52% helix, 10% strand	Q9KZR7

Ligands and binding sites

HEM · Protoporphyrin IX containing Fe · ligand · chains A
PIM · 4-phenyl-1H-imidazole · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	418	0.86	0.94	47	HEM, PIM
2	131	0.44	0.77	27	empty
3	51	0.39	0.81	15	empty
4	74	0.33	0.75	13	empty
5	59	0.31	0.76	14	empty

Compared structures

1ODO · 1.85 A structure of CYP154A1 from Streptomyces coelicolor A3(2) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9KZR7
Elsewhere: RCSB PDB 1ODO · PDBe 1ODO · UniProt Q9KZR7

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