MolNFT v1 · #169347 · protein
An orthogonal seryl-tRNA SYNTHETASE/TRNA pair for noncanonical amino acid mutagenesis in escherichia COLI
6X94: “An orthogonal seryl-tRNA SYNTHETASE/TRNA pair for noncanonical amino acid mutagenesis in escherichia COLI”. X-ray diffraction, 4 ligands (SSA, K, SCN). MolNFT v1 #169347 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6X94
- Type
- protein
- Length
- 413 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8PYJ6
- Ligands
- SSA, K, SCN, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 413 | — | Q8PYJ6 |
Ligands and binding sites
- SSA · 5'-O-(N-(L-seryl)-sulfamoyl)adenosine · ligand · chains A
- K · Potassium ion · metal · chains A
- SCN · Thiocyanate ion · ion · 5 copies · chains A
- CL · Chloride ion · ion · chains A
- PEG · Di(hydroxyethyl)ether · additive · 3 copies · chains A
- DMS · Dimethyl sulfoxide · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6X94 · An orthogonal seryl-tRNA synthetase/tRNA pair for noncanonical amino acid mutagenesis in… · the same entry in another collection · chain A against A, TM-score 1.00
- Q8PYJ6 · AlphaFold monomer V2.0 prediction for serine--tRNA ligase (Q8PYJ6) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8PYJ6
- Elsewhere: RCSB PDB 6X94 · PDBe 6X94 · UniProt Q8PYJ6
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