MolNFT v1 · #169344 · protein
Structure of the guanine nucleotide exchange factor SEC12 bound to the small GTPase SAR1
6X90: “Structure of the guanine nucleotide exchange factor SEC12 bound to the small GTPase SAR1”. X-ray diffraction, 1 ligand (K). MolNFT v1 #169344 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6X90
- Type
- protein
- Length
- 485 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P11655, P20606
- Ligands
- K
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 344 | — | P11655 |
| A | — | protein | 141 | — | P20606 |
Ligands and binding sites
- K · Potassium ion · metal · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6X90 · Structure of the guanine nucleotide exchange factor Sec12 bound to the small GTPase Sar1 · the same entry in another collection · chain B against B, TM-score 1.00
- P11655 · AlphaFold monomer V2.0 prediction for guanine nucleotide-exchange factor SEC12 (P11655) · a predicted model of the same protein · chain B against A, TM-score 0.99
- P20606 · AlphaFold monomer V2.0 prediction for small copii coat GTPase SAR1 (P20606) · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P11655
- Every structure of UniProt P20606
- Elsewhere: RCSB PDB 6X90 · PDBe 6X90 · UniProt P11655 · UniProt P20606
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