MolNFT v1 · #169205 · protein
SARS-COV2 spike glycoprotein N-terminal heptad repeat domain + SARS- COV2(QEYKKEKE)
6X45: “SARS-COV2 spike glycoprotein N-terminal heptad repeat domain + SARS- COV2(QEYKKEKE)”. X-ray diffraction, 1 ligand (NH2). MolNFT v1 #169205 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6X45
- Type
- protein
- Length
- 260 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0DTC2
- Ligands
- NH2
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| E, F | — | protein | 34 | — | P0DTC2 |
| D | — | protein | 36 | — | P0DTC2 |
| C | — | protein | 52 | — | P0DTC2 |
| B | — | protein | 53 | — | P0DTC2 |
| A | — | protein | 51 | — | P0DTC2 |
Ligands and binding sites
- NH2 · Amino group · ion · chains D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6X45 · SARS-CoV2 spike glycoprotein N-terminal heptad repeat domain + SARS-CoV2(QEYKKEKE) · the same entry in another collection · chain E against E, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DTC2
- Elsewhere: RCSB PDB 6X45 · PDBe 6X45 · UniProt P0DTC2
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