MolNFT v1 · #169137 · protein
PDZ domain from choanoflagellate gipc (mbgipc)
6X1X · Mbgipc protein: “PDZ domain from choanoflagellate gipc (mbgipc)”. X-ray diffraction, 1 pocket (best druggability 0.31). MolNFT v1 #169137 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6X1X
- Type
- protein
- Length
- 93 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Mbgipc protein
- UniProt
- A9VCZ3
- Pockets
- 1 · best druggability 0.31
Structure
x-ray diffraction · 1 distinct chain · 11% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Mbgipc protein | protein | 93 | 11% helix, 32% strand | A9VCZ3 |
Ligands and binding sites
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 56 | 0.31 | 0.75 | 10 | empty |
Compared structures
- 6X1X · PDZ domain from choanoflagellate GIPC (mbGIPC) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9VCZ3
- Elsewhere: RCSB PDB 6X1X · PDBe 6X1X · UniProt A9VCZ3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.