MolNFT v1 · #169133 · protein
Structure of phis Fab (SC50-3) in complex with phis mimetic peptide
6X1T: “Structure of phis Fab (SC50-3) in complex with phis mimetic peptide”. X-ray diffraction, 3 ligands (NAG, FUC, SO4). MolNFT v1 #169133 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6X1T
- Type
- protein
- Length
- 2,639 residues
- Chains
- 18
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- NAG, FUC, SO4
Structure
x-ray diffraction · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H, A, C, E | — | protein | 221 | — | — |
| L, B, D, F, I | — | protein | 214 | — | — |
| G | — | protein | 217 | — | — |
| J | — | protein | 219 | — | — |
| K | — | protein | 212 | — | — |
| M, N | — | protein | 6 | — | — |
| O, Q | — | protein | 7 | — | — |
| P | — | protein | 5 | — | — |
| R | — | protein | 6 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 11 copies · chains H, L, A, B, C, D, E, F, G, I, J, K
- FUC · alpha-L-fucopyranose · sugar · chains A
- SO4 · Sulfate ion · ion · 11 copies · chains H, L, A, B, C, D, F, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6X1T · Structure of pHis Fab (SC50-3) in complex with pHis mimetic peptide · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6X1T · PDBe 6X1T
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