MolNFT v1 · #168952 · protein
Structure of vcindy-na-FAB84 in nanodisc
6WW5: “Structure of vcindy-na-FAB84 in nanodisc”. Electron microscopy, 1 ligand (6PE). MolNFT v1 #168952 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WW5
- Type
- protein
- Length
- 1,764 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0H3AG83
- Ligands
- 6PE
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 445 | — | A0A0H3AG83 |
| C, E | — | protein | 228 | — | — |
| F, D | — | protein | 209 | — | — |
Ligands and binding sites
- 6PE · 1,2-dihexanoyl-sn-glycero-3-phosphoethanolamine · ligand · 2 copies · chains A, B
- HEX · Hexane · additive · 2 copies · chains A, B
- OCT · N-octane · additive · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WW5 · Structure of VcINDY-Na-Fab84 in nanodisc · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3AG83
- Elsewhere: RCSB PDB 6WW5 · PDBe 6WW5 · UniProt A0A0H3AG83
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