GL1X · GenesisL1 explorer

MolNFT v1 · #168922 · protein

Takifugu rubripes vkor-like with vitamin K1 in noncatalytic state

6WV9: “Takifugu rubripes vkor-like with vitamin K1 in noncatalytic state”. X-ray diffraction, 1 ligand (CRO). MolNFT v1 #168922 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6WV9
Type
protein
Length
411 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P42212, Q6TEK8
Ligands
CRO

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein411—P42212, Q6TEK8

Ligands and binding sites

  • CRO · {2-[(1R,2R)-1-amino-2-hydroxypropyl]-4-(4-hydroxybenzylidene)-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6WV9 · Takifugu rubripes VKOR-like with vitamin K1 in noncatalytic state · the same entry in another collection · chain A against A, TM-score 1.00
  • P42212 · AlphaFold monomer V2.0 prediction for green fluorescent protein (P42212) · a predicted model of the same protein · chain A against A, TM-score 0.55

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