MolNFT v1 · #168706 · protein
Structure of hepatitis C virus envelope glycoprotein E2 core from genotype 1A bound to neutralizing antibody HC1AM and non neutralizing antibody E1
6WOQ: “Structure of hepatitis C virus envelope glycoprotein E2 core from genotype 1A bound to neutralizing antibody…”. X-ray diffraction, 1 ligand (NAG). MolNFT v1 #168706 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WOQ
- Type
- protein
- Length
- 1,940 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- NAG
Structure
x-ray diffraction · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 215 | — | — |
| B, D | — | protein | 217 | — | — |
| E | — | protein | 137 | — | — |
| J | — | protein | 218 | — | — |
| K | — | protein | 212 | — | — |
| C | — | protein | 191 | — | — |
| F | — | protein | 125 | — | — |
| G | — | protein | 213 | — | — |
| H | — | protein | 195 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 13 copies · chains E, J, K, F, H, A, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WOQ · Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6WOQ · PDBe 6WOQ
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