MolNFT v1 · #16856 · protein

Holliday junction resolving enzyme

1OB9 · Holliday junction resolvase: “Holliday junction resolving enzyme”. X-ray diffraction, 1 pocket (best druggability 0.31). MolNFT v1 #16856 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1OB9
Type: protein
Length: 124 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Holliday junction resolvase
UniProt: Q97YX6
Pockets: 1 · best druggability 0.31

Structure

x-ray diffraction · 1 distinct chain · 31% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Holliday junction resolvase	protein	124	31% helix, 35% strand	Q97YX6

Ligands and binding sites

FMT · Formic acid · additive · 7 copies · chains A
EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	53	0.31	0.77	21	empty

Compared structures

1OB9 · Holliday Junction Resolving Enzyme · the same entry in another collection · chain A against A, TM-score 1.00
Q97YX6 · AlphaFold monomer V2.0 prediction for holliday junction resolvase hje (Q97YX6) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q97YX6
Elsewhere: RCSB PDB 1OB9 · PDBe 1OB9 · UniProt Q97YX6

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