MolNFT v1 · #168559 · DNA
Crystal structure analysis of a POLY(THYMINE) DNA duplex
6WK7 · DNA (5'-D(*TP*TP*TP*TP*TP*T)-3'): “Crystal structure analysis of a POLY(THYMINE) DNA duplex”. X-ray diffraction, 1 ligand (AX2). MolNFT v1 #168559 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WK7
- Type
- DNA
- Length
- 12 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*TP*TP*TP*TP*TP*T)-3')
- Ligands
- AX2
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, C | DNA (5'-D(*TP*TP*TP*TP*TP*T)-3') | dna | 6 | — | — |
Ligands and binding sites
- AX2 · 1,3,5-triazine-2,4,6-triamine · ligand · 6 copies · chains B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- B–C · 87 Ų buried · 0 hydrogen bonds · nucleic-nucleic
Compared structures
- 6WK7 · Crystal Structure Analysis of a poly(thymine) DNA duplex · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6WK7 · PDBe 6WK7
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