GL1X · GenesisL1 explorer

MolNFT v1 · #168554 · protein

SETD3 mutant (N255V) in complex with an actin peptide with HIS73 replaced with methionine

6WK2: “SETD3 mutant (N255V) in complex with an actin peptide with HIS73 replaced with methionine”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #168554 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6WK2
Type
protein
Length
1,006 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P63261, Q86TU7
Ligands
NA

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
Y, C—protein19—P63261
A, D—protein484—Q86TU7

Ligands and binding sites

  • NA · Sodium ion · metal · chains D
  • EDO · 1,2-ethanediol · additive · 8 copies · chains A, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6WK2 · SETD3 mutant (N255V) in Complex with an Actin Peptide with His73 Replaced with Methionine · the same entry in another collection · chain C against C, TM-score 1.00
  • Q86TU7 · AlphaFold monomer V2.0 prediction for actin-histidine N-methyltransferase (Q86TU7) · a predicted model of the same protein · chain A against A, TM-score 0.99
  • P63261 · AlphaFold monomer V2.0 prediction for actin, cytoplasmic 2 (P63261) · a predicted model of the same protein · chain Y against A, TM-score 0.21

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