MolNFT v1 · #168482 · protein
Histone deacetylases complex with peptide macrocycles
6WHZ: “Histone deacetylases complex with peptide macrocycles”. X-ray diffraction, 2 ligands (NA, ZN). MolNFT v1 #168482 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WHZ
- Type
- protein
- Length
- 1,125 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q92769
- Ligands
- NA, ZN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 372 | — | Q92769 |
| B | — | protein | 364 | — | Q92769 |
| C | — | protein | 365 | — | Q92769 |
| D, F, G | — | protein | 8 | — | — |
Ligands and binding sites
- NA · Sodium ion · metal · 5 copies · chains A, B, C
- ZN · Zinc ion · metal · 3 copies · chains A, D, B, F, C, G
- PGE · Triethylene glycol · additive · 4 copies · chains A, B, C
- PG4 · Tetraethylene glycol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92769
- Elsewhere: RCSB PDB 6WHZ · PDBe 6WHZ · UniProt Q92769
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