MolNFT v1 · #168458 · protein

MEKK1 tog domain (548-867)

6WHB · Mitogen-activated protein kinase kinase kinase 1: “MEKK1 tog domain (548-867)”. X-ray diffraction, 1 pocket (best druggability 0.34). MolNFT v1 #168458 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6WHB
Type: protein
Length: 284 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Mitogen-activated protein kinase kinase kinase 1
EC: 2.7.11.25
UniProt: Q13233
Pockets: 1 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain · 72% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Mitogen-activated protein kinase kinase kinase 1 (EC 2.7.11.25)	protein	284	72% helix, 0% strand	Q13233

Ligands and binding sites

ACT · Acetate ion · additive · 5 copies · chains A
GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	67	0.34	0.76	11	empty

Compared structures

6WHB · MEKK1 TOG domain (548-867) · the same entry in another collection · chain A against A, TM-score 1.00
Q13233 · AlphaFold monomer V2.0 prediction for mitogen-activated protein kinase kinase kinase 1… · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q13233
Elsewhere: RCSB PDB 6WHB · PDBe 6WHB · UniProt Q13233

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