MolNFT v1 · #168435 · protein
Crystal structure of a marine metagenome trap solute binding protein specific for pyroglutamate (sorcerer II global ocean sampling expedition, unidentified microbe, SCF7180008839099) in complex with co-purified pyroglutamate
6WGM: “Crystal structure of a marine metagenome trap solute binding protein specific for pyroglutamate (sorcerer II…”. X-ray diffraction, 1 ligand (CL). MolNFT v1 #168435 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WGM
- Type
- protein
- Length
- 305 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G5ZWD6
- Ligands
- CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 305 | — | G5ZWD6 |
Ligands and binding sites
- CL · Chloride ion · ion
- FMT · Formic acid · additive · 10 copies · chains A
- EDO · 1,2-ethanediol · additive · 6 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WGM · Crystal structure of a marine metagenome TRAP solute binding protein specific for… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G5ZWD6
- Elsewhere: RCSB PDB 6WGM · PDBe 6WGM · UniProt G5ZWD6
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