MolNFT v1 · #168385 · protein
DENV1 NS1 in complex with neutralizing 2B7 Fab fragment
6WEQ: “DENV1 NS1 in complex with neutralizing 2B7 Fab fragment”. X-ray diffraction, 2 ligands (NAG, SO4). MolNFT v1 #168385 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WEQ
- Type
- protein
- Length
- 3,073 residues
- Chains
- 12
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9J7C6
- Ligands
- NAG, SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 340 | — | Q9J7C6 |
| E | — | protein | 214 | — | — |
| F, H, J, L | — | protein | 215 | — | — |
| G, I, K | — | protein | 213 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 8 copies · chains A, B, C, D
- SO4 · Sulfate ion · ion · chains C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6WEQ · DENV1 NS1 in complex with neutralizing 2B7 Fab fragment · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9J7C6
- Elsewhere: RCSB PDB 6WEQ · PDBe 6WEQ · UniProt Q9J7C6
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