MolNFT v1 · #168333 · protein
Crystal structure of laccase from thermus thermophilus HB27 with an open conformation of beta-hairpin (average deposited dose 12.91 mgy)
6WCL: “Crystal structure of laccase from thermus thermophilus HB27 with an open conformation of beta-hairpin…”. X-ray diffraction, 1 ligand (CU), 4 pockets (best druggability 0.57). MolNFT v1 #168333 on GenesisL1: 3D structure, binding…
- PDB
- 6WCL
- Type
- protein
- Length
- 440 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Laccase
- EC
- 1.10.3.2
- UniProt
- Q72HW2
- Ligands
- CU
- Pockets
- 4 · best druggability 0.57
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Laccase (EC 1.10.3.2) | protein | 440 | 6% helix, 47% strand | Q72HW2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 245 | 0.57 | 0.78 | 26 | 1PE |
| 2 | 147 | 0.50 | 0.79 | 28 | empty |
| 3 | 93 | 0.39 | 0.77 | 22 | empty |
| 4 | 55 | 0.29 | 0.75 | 15 | empty |
Compared structures
- 6WCL · Crystal structure of Laccase from Thermus thermophilus HB27 with an open conformation of… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q72HW2
- Elsewhere: RCSB PDB 6WCL · PDBe 6WCL · UniProt Q72HW2
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