MolNFT v1 · #168313 · protein
Peptide-bound SARS-cov-2 NSP9 RNA-replicase
6WC1 · SARS-cov-2 non-structural protein 9: “Peptide-bound SARS-cov-2 NSP9 RNA-replicase”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #168313 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6WC1
- Type
- protein
- Length
- 223 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SARS-cov-2 non-structural protein 9
- Ligands
- SO4
Structure
x-ray diffraction · 2 distinct chains · 13% helix, 46% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SARS-cov-2 non-structural protein 9 | protein | 112 | 13% helix, 47% strand | — |
| B | SARS-cov-2 non-structural protein 9 | protein | 111 | 13% helix, 45% strand | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 986 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 6WC1 · Peptide-bound SARS-CoV-2 Nsp9 RNA-replicase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6WC1 · PDBe 6WC1
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