MolNFT v1 · #168247 · protein

Solution NMR structure of the myristoylated feline immunodeficiency virus matrix protein

6WA3: “Solution NMR structure of the myristoylated feline immunodeficiency virus matrix protein”. Solution nmr, 1 ligand (MYR), 1 pocket (best druggability 0.55). MolNFT v1 #168247 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 6WA3
Type: protein
Length: 118 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Matrix protein
UniProt: Q66971
Ligands: MYR
Pockets: 1 · best druggability 0.55

Structure

solution nmr · 1 distinct chain · 59% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Matrix protein	protein	118	59% helix, 3% strand	Q66971

Ligands and binding sites

MYR · Myristic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	73	0.55	0.87	20	MYR

Modifications

Observed in the structure: 1 lipid (myristoylation).

Compared structures

6WA3 · Solution NMR structure of the myristoylated feline immunodeficiency virus matrix protein · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q66971
Elsewhere: RCSB PDB 6WA3 · PDBe 6WA3 · UniProt Q66971

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