MolNFT v1 · #167956 · protein
Co-crystal structures of chikv NSP3 macrodomain with pyrimidone fragments
6W0T: “Co-crystal structures of chikv NSP3 macrodomain with pyrimidone fragments”. X-ray diffraction, 1 ligand (S6Y). MolNFT v1 #167956 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6W0T
- Type
- protein
- Length
- 639 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5XXP4
- Ligands
- S6Y
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 160 | — | Q5XXP4 |
| D | — | protein | 159 | — | Q5XXP4 |
Ligands and binding sites
- S6Y · 6-(2-methylpropyl)-2-oxidanylidene-5~{H}-pyrimidine-4-carboxylic acid · ligand · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6W0T · Co-crystal structures of CHIKV nsP3 macrodomain with pyrimidone fragments · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XXP4
- Elsewhere: RCSB PDB 6W0T · PDBe 6W0T · UniProt Q5XXP4
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